Genome sequence of the Lebeckia ambigua-nodulating “Burkholderia sprentiae” strain WSM5005ᵀ

Authors

• Wayne Reeve, Murdoch University
• Sofie E. De Meyer, Murdoch University
• Jason Terpolilli, Murdoch University
• Vanessa Melino, Murdoch University
• Julie Kaye Ardley, Murdoch UniversityFollow
• Tian Rui, Murdoch University
• Ravi P. Tiwari, Murdoch University
• John Gregory Howieson, Murdoch UniversityFollow
• Ronald J. Yates, Department of Primary Industries and Regional Development, Western AustraliaFollow
• Graham William O'Hara, Murdoch UniversityFollow
• Megan Lu, DOE Joint Genome Institute, USA
• David Bruce, DOE Joint Genome Institute, USA
• Chris Detter, DOE Joint Genome Institute, USA
• Roxanne Tapia, DOE Joint Genome Institute, USA
• Cliff Han, DOE Joint Genome Institute, USA
• Chia-Lin Wei, DOE Joint Genome Institute, USA
• Marcel Huntemann, DOE Joint Genome Institute, USA
• James Han, DOE Joint Genome Institute, USA
• I-Min Chen, Lawrence Berkeley National Laboratory, USA
• Konstantinos Mavromatis, DOE Joint Genome Institute, USA
• Victor Markowitz, Lawrence Berkeley National Laboratory, USA
• Ernest Szeto, Lawrence Berkeley National Laboratory, USA
• Natalia Ivanova, DOE Joint Genome Institute, USA
• Natalia Mikhailova, DOE Joint Genome Institute, USA
• Galina Ovchinikova, DOE Joint Genome Institute, USA
• Ioanna Pagani, DOE Joint Genome Institute, USA
• Amrita Pati, DOE Joint Genome Institute, USA
• Lynne Goodwin, Los Alamos National Laboratory, USA
• Lin Peters, DOE Joint Genome Institute, USA
• Sam Pitluck, DOE Joint Genome Institute, USA
• Tanja Woyke, DOE Joint Genome Institute, USA
• Nikos Kyrpides, DOE Joint Genome Institute, USA

Document Type

Article

Publication Date

12-20-2013

Journal Title

Standards in Genomic Sciences

ISSN

1944-3277

Keywords

root-nodule bacteria, nitrogen fixation, rhizobia, Alphaproteobacteria

Disciplines

Agronomy and Crop Sciences | Plant Breeding and Genetics

Abstract

“Burkholderia sprentiae” strain WSM5005T is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated in Australia from an effective N2-fixing root nodule of Lebeckia ambigua collected in Klawer, Western Cape of South Africa, in October 2007. Here we describe the features of “Burkholderia sprentiae” strain WSM5005T, together with the genome sequence and its annotation. The 7,761,063 bp high-quality-draft genome is arranged in 8 scaffolds of 236 contigs, contains 7,147 protein-coding genes and 76 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program.

Recommended Citation

Reeve, W., De Meyer, S., Terpolilli, J. et al. Genome sequence of the Lebeckia ambigua-nodulating “Burkholderia sprentiae” strain WSM5005T. Stand in Genomic Sci 9, 385–394 (2013). https://doi.org/10.4056/sigs.4558268